"Healthcare Reform: The Employer Perspective"
The Affordable Care Act has the potential to affect the health insurance choices and responsibilities of employers as healthcare coverage is expanded to include roughly 32 of the 54 million uninsured Americans. The implications of the reforms will vary depending on the employer's size. Some small businesses, which historically have faced multiple barriers to offering affordable health insurance to their employees, will now receive tax credits to assist in purchasing coverage, while larger employers will face new requirements to contribute to the cost of their employees' health insurance coverage. In this health forum we will discuss the impact of the Affordable Care Act on both small and large businesses.
When: Wednesday, October 24th, 6:00-8:00pm
6:00-6:30pm: Coffee and Reception
6:30-7:15pm: Panel Presentations
7:15-8:00pm: Question and Answer Session
Where: Neuroscience Research Building Auditorium, UCLA
635 Charles E. Young Drive South, Los Angeles
Panelists include:
Moderated by:
To RSVP, please click HERE.
To forward this invitation to a friend or colleague, please click HERE.
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Thursday, October 11, 2012
Healthcare Reform: The Employer Perspective
Monday, October 8, 2012
ROC curve in BioStatistics
ROC (Receiver Operating Characteristic) Curve is used to evaluate the accuracy of a test to discriminate disease cases from normal cases, i.e. the performance of diagnosis. Also, it can be used to compare two or more tests [1]. ROC curve is to plot the Sensitivity (true positive rate) against the 1-Specificity (false positive rate). Each point on the curve represents a sensitivity/specificity pair and results in a particular decision threshold. The Area Under the Curve (AUC) is a measure to describe how well the test can distinguish the disease and normal.
When you consider the test in two populations, one with disease and the other normal, you can rarely observe a perfect separation between the two groups. Assume the distribution of the test results is normal, these two test results will overlap as [1],
There are some statistics based on TN, TP, FN, FP as below [1],
An ROC curve demonstrates several things [3]:
ROC curve in SAS
The ROC plot in SAS program is embedded in proc logistic procedure as following [3],
ods graphics on;
ods html;
proc logistic data=mydata plots(only)=(roc);
model Y=marker;
run;
ods html close;
ods graphics off;
ROC curve in R
You can use the function "roccurve" to plot ROC curve in R. Also, you can implement this function in SAS by SUBMIT.
You can use R in SAS by the code SUBMIT [3]. The SUBMIT statement takes options, and it is the option R on the SUBMIT statement which indicates that code is to be directed to R. Thus, a clearer indication of the usage of submit block code would be:
submit;
<SAS data step or procedure code to be executed>
endsubmit;
submit / R; <R code to be executed>
endsubmit;
Now, it is likely that R code is being submitted from a SAS session because the user is performing data manipulation (and perhaps some analyses) in SAS, but R has some functions for data analysis which are not available in SAS. Thus, data exist in the SAS session, and must be passed to the R session. The submit block directs code to an R session, but the user also needs to exchange data between SAS and R – often in both directions.
References:
1. http://www.medcalc.org/manual/roc-curves.php
2. Zweig MH, Campbell G (1993) Receiver-operating characteristic (ROC) plots: a fundamental evaluation tool in clinical medicine. Clinical Chemistry 39:561-577. [Abstract]
3. ROC curve in SAS: http://labs.fhcrc.org/pepe/dabs/ROC_Curve_Plotting_in_SAS_9_2.pdf
When you consider the test in two populations, one with disease and the other normal, you can rarely observe a perfect separation between the two groups. Assume the distribution of the test results is normal, these two test results will overlap as [1],
For every possible cut-off point or criterion value you select to discriminate between the two populations, there will be some cases with the disease correctly classified as positive (TP = True Positive fraction), but some cases with the disease will be classified negative (FN = False Negative fraction). On the other hand, some cases without the disease will be correctly classified as negative (TN = True Negative fraction), but some cases without the disease will be classified as positive (FP = False Positive fraction).
There are some statistics based on TN, TP, FN, FP as below [1],
The different fractions (TP, FP, TN, FN) are represented in the following table.
Disease | |||||||
Test | Present | n | Absent | n | Total | ||
Positive | True Positive (TP) | a | False Positive (FP) | c | a + c | ||
Negative | False Negative (FN) | b | True Negative (TN) | d | b + d | ||
Total | a + b | c + d |
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When you select a higher criterion value, the false positive fraction will decrease with increased specificity but on the other hand the true positive fraction and sensitivity will decrease; Meanwhile, when you select a lower criterion value, then the true positive fraction and sensitivity will increase. On the other hand the false positive fraction will also increase, and therefore the true negative fraction and specificity will decrease.
The ROC curve
In a Receiver Operating Characteristic (ROC) curve the true positive rate (Sensitivity) is plotted in function of the false positive rate (100-Specificity) for different cut-off points. Each point on the ROC curve represents a sensitivity/specificity pair corresponding to a particular decision threshold. A test with perfect discrimination (no overlap in the two distributions) has a ROC curve that passes through the upper left corner (100% sensitivity, 100% specificity). Therefore the closer the ROC curve is to the upper left corner, the higher the overall accuracy of the test [2].
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An ROC curve demonstrates several things [3]:
- It shows the trade-off between sensitivity and specificity (any increase in sensitivity will be accompanied by a decrease in specificity).
- The closer the curve follows the left-hand border and then the top border of the ROC space, the more accurate the test.
- The closer the curve comes to the 45-degree diagonal of the ROC space, the less accurate the test.
- The slope of the tangent line at a cut point gives the likelihood ratio (LR) for that value of the test.
- The area under the curve is a measure of test accuracy.
ROC curve in SAS
The ROC plot in SAS program is embedded in proc logistic procedure as following [3],
ods graphics on;
ods html;
proc logistic data=mydata plots(only)=(roc);
model Y=marker;
run;
ods html close;
ods graphics off;
ROC curve in R
You can use the function "roccurve" to plot ROC curve in R. Also, you can implement this function in SAS by SUBMIT.
You can use R in SAS by the code SUBMIT [3]. The SUBMIT statement takes options, and it is the option R on the SUBMIT statement which indicates that code is to be directed to R. Thus, a clearer indication of the usage of submit block code would be:
submit;
<SAS data step or procedure code to be executed>
endsubmit;
submit / R; <R code to be executed>
endsubmit;
Now, it is likely that R code is being submitted from a SAS session because the user is performing data manipulation (and perhaps some analyses) in SAS, but R has some functions for data analysis which are not available in SAS. Thus, data exist in the SAS session, and must be passed to the R session. The submit block directs code to an R session, but the user also needs to exchange data between SAS and R – often in both directions.
References:
1. http://www.medcalc.org/manual/roc-curves.php
2. Zweig MH, Campbell G (1993) Receiver-operating characteristic (ROC) plots: a fundamental evaluation tool in clinical medicine. Clinical Chemistry 39:561-577. [Abstract]
3. ROC curve in SAS: http://labs.fhcrc.org/pepe/dabs/ROC_Curve_Plotting_in_SAS_9_2.pdf
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